BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020E11SP1|AL427636
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1492 0.0
>3x_Contig1700
Length = 16332
Score = 1492 bits (738), Expect = 0.0
Identities = 830/872 (95%), Gaps = 4/872 (0%)
Strand = Plus / Plus
Query: 1 tgacawaggttccaatatttgatattgtagctaggtctcaagttgctctgatattctctg 60
||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14080 tgacataggttccattatttgatattgtagctaggtctccagttgctctgatattctctg 14139
Query: 61 tgatgatagaactgttttatattgaaggttatgttgatgaaatattcatagttggtaata 120
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 14140 tgatgatagaactgtttt-tattgaaggttatgttgatgatatattcatagttggtaat- 14197
Query: 121 gctwgcggacgtttgaatgacaaatccccctgttctggtctgcaacggataaaaawrgtt 180
||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 14198 gcttgcggacgtttgaatgacaaatccccctgttctggtctgcaacgg-taaaaccggtt 14256
Query: 181 ttgcagttctggtgcaagaatggmaagccacatttacctaagtcgaaggcttgcttcctg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14257 ttgcagttctggtgcaagaatggcaagccacatttacctaagtcgaaggcttgcttcctg 14316
Query: 241 tggtacggtacggtcatctctacatctttttgtcattttaagttccaawagwtttwcgat 300
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| || |
Sbjct: 14317 tggtacggtacggtcatctctacatctttttgtcattttaagttccaatagtttttcgtt 14376
Query: 301 tacccttattagtgacttcagcggctaattcattggtatataaatstcttcatcagaatc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 14377 tacccttattagtgacttcagcggctaattcattggtatataaatctcttcatcagaatc 14436
Query: 361 taatgattagagtatcgttttttcaacmwacwttatmgtwgttcwatagcaaggcactag 420
||||||||||||||||||||||||||| || |||| || |||| |||||||||||||||
Sbjct: 14437 taatgattagagtatcgttttttcaacctactttatcgttgttctatagcaaggcactag 14496
Query: 421 gtgggttaaaggcatactgatcatataatgagtgttgcagcggggaaattggtattcatg 480
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 14497 gtgggttaaaggcatactgatcatataatgagtgttgcagcggggactttggtattcatg 14556
Query: 481 gcwgatggmagtctaaagcccatagaagatgtcacgatagaggaagaagtattgtcctca 540
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14557 gctgatggcagtctaaagcccatagaagatgtcacgatagaggaagaagtattgtcctca 14616
Query: 541 gatgggtctgccaatttcgtgcagagcatcattaactgccatgaaagaatgtttgaaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14617 gatgggtctgccaatttcgtgcagagcatcattaactgccatgaaagaatgtttgaaatc 14676
Query: 601 actcagcaaaatccacatcgtgcccataagaataaagagwgtgaattttgcttcctttga 660
||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14677 actcagcttagtccacatcgtgcccataagaataaaga-tgtgaattttgcttcctttga 14735
Query: 661 tatgawaaggttgagatgttcgggttctmaagcattgatgttatcaaaccgwatawtgaa 720
||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||
Sbjct: 14736 tatgataaggttgagatgttcgggttctcaagctttgatgttatcaaaccgtatattgaa 14795
Query: 721 ggaatgtttcaggatagacgtaatccagaagaaaggctgttggaacctggggtcatacca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14796 ggaatgtttcaggatagacgtaatccagaagaaaggctgttggaacctggggtcatacca 14855
Query: 781 gctggtaataccaccgtggattctracgawactrctgtcgatgagaacgatggaggtatc 840
|||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||
Sbjct: 14856 gctggtaataccaccgtggattctgacgatactgctgtcgatgagaacgatggtggtatc 14915
Query: 841 gttcccacttctgatatagtkgtagttgatga 872
|||||||||||||||||||| |||||||||||
Sbjct: 14916 gttcccacttctgatatagtggtagttgatga 14947
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4925
Number of Sequences: 1807
Number of extensions: 4925
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.6 bits)